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NM Books
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You’re best getting a choice of super form (found on the ATO website) rather than just asking the employee.
Definitely keep track of all payments in your payroll system so reporting both super and PAYG is easier. You may also need to look at registering for PAYG withholding. This can be done by your tax accountant.
PAYG is reported on your BAS quarterly (if that’s how you’ve chosen to report, and assuming you’re registered for GST)
Contact the super fund for paying the super.
Hope this helps.